CDS
| Accession Number | TCMCG051C42195 |
| gbkey | CDS |
| Protein Id | XP_024442297.1 |
| Location | complement(join(12354408..12354534,12356056..12356305,12356379..12356538,12357765..12357858,12357974..12358113,12359444..12359767,12359849..12359935,12360119..12360346,12360455..12360586,12360716..12360931,12361646..12361687,12361774..12361869,12361958..12362005,12362130..12362195,12363309..12363353,12363619..12363681,12363818..12363888,12364729..12364829,12364918..12364994,12365371..12365415)) |
| Gene | LOC7456644 |
| GeneID | 7456644 |
| Organism | Populus trichocarpa |
Protein
| Length | 803aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024586529.1 |
| Definition | ADP-ribosylation factor GTPase-activating protein AGD1 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | T |
| Description | BAR domain of APPL family |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] ko04147 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12489
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04144
[VIEW IN KEGG] map04144 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0006996 [VIEW IN EMBL-EBI] GO:0007010 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009987 [VIEW IN EMBL-EBI] GO:0016043 [VIEW IN EMBL-EBI] GO:0030139 [VIEW IN EMBL-EBI] GO:0031410 [VIEW IN EMBL-EBI] GO:0031982 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071840 [VIEW IN EMBL-EBI] GO:0097708 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGCAGTTCTCTAAACTTGACGATTCGCCGATGTTTCGGCAACAGATGCAATGCATGGAAGAAAGCGCGGAGGCATTACGAGGGAGGTGTTTGAAGTTCTACAAAGGATGTCGAAAGTACACAGAAGGGCTTGGAGAAGGATATGATGGGGATATTGCTTTTGCGAGTGCGCTTGAAGCTTTTGGAGGAGGACATAATGATCCTATTTGTGTTGCTTTTGGAGGTCCTGTTATGAACAAATTCACAATCACGTTGAGAGAAATTGGTACATACAAGGAAGTTCTTCGGTCACAGGTGGAGCACATGCTAAATGATAAGTTGCAGCACTTTGTTAATTTTGATCTGCAAGACATCAAGGAAGCACGGAAACGTTTTGACAAGGCTTCCGTGATGTATGATCAGGCGCGTGATAAGTTTCTTTCACTGAGGAAGAGTACTAGGATGGATGTAACTTCTGCTATACAGGAGGAACTGCACAATGCAAGATCCTCTTTTGAGCAAGCACGCTTTAATTTGATTAGTGCTCTTTCTGTTGTCGAGGCCAAGAGGAGATTTGAGTTTCTGGAGGCTGTTAGTGGAACAATGGATGCTCATCTTCGATTCTTCAAGCAGGGATATGAGCTATTGCACCAGATGGAGCCTTTCATTAACCAGGTCTTGGCTTATGCACAACAATGTAGAGAATGTTCCAACTATGATCAAGTATCCCTTCATGAAAGGATGCAAGAGTTCATGAAGCATATTGATCAAGAAAGTAGGCATTCTGTAAATGACATTTTCAGTTCTCCTCGTGAAGATAGCGTGCGACCTGCTGCTAGGAGTTCACAAAAAGTGATAGAGGAGGTTATGCAATCTGCTGCTAAGGGGAAGGTTCAAACCATTCGACAAGGATATCTATCAAAGCGTTCCTCAAATTTGAGAGGTGATTGGAAAAGAAGGTTTTTTGTTCTTGATAATCGAGGAATGCTTTACTACTATCGCAAGCCATTCAACTGGTCATCCTCAGGTGGGAGTCAATCCGCGGTACAGAGAAATGGTTCTTCTGAAAATGGTCAAGGATTGTTGAGTCGGTGGCTTTCTTCTCACTACCATGGTGGTGTGCATGATGAAAAATCTGTTGCTCGTCACACTGTGAACCTTCTAACATCAACAATAAAGGTTGATGCAGATCAATCAGATTTAAGATTCTGCTTCAGAATTATTTCACCAATTAAAGTCTACACTTTGCAGGCAGAGAATGCACTAGACCAAATGGACTGGATTGAAAAGATAAATGGGGTGATCACTTCGTTATTGAGTTCCCAGATAACCGAAAGATTTCTTTCTTCTAGTCCGATGGGAAGTGGTGACCATCACTCTGTTAGTGAGAGTGGCTCGTTCATAGATTCTCCTGATCAGACAGAGATTGAGGAGTTCACGTTTGATACTGGAAGTCATTTACATCCAACCAGAAGTTTGCGACGACAAGATTACACCATAAAAATTGAAAAGCCAATTGATGTGTTGAGAAGAGTACCTGGGAATGACAGATGTGCTGATTGTGGTGCACCTGAACCAGACTGGGCATCCTTAAACCTTGGTATTCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGGGTACATATATCAAAGGTAAGATCACTAACACTTGATGTAAAAGTGTGGGATCCATCTATCTTAAACTTGTTTCAGTCACTGGGGAATTATTGTGCAAACACAATTTGGGAGGAGTTGTTGCATCCAACAAGTTCTACTTCTGATGAAGCACTCAGATTTTCTAAATCTGATAGACACAAGCAGTTCCGCCCAAGGAAACCCAATCAAGATGATCCTATCTCAGTGAAGGAGCAGTTTATTCATGCGAAGTATGCACAAAAAGTTTTTGTATTCAAGTCAAGGGACAATCAACATCCAGTGGTGCAACAGATGTGGGAAAGCATCCATGCTAATGACAAGAAAGGAGTTTACCGCCATATTGTCTGCTCTGGGATAGATGTCAATGCTATCCATGGACAAGCATCATTTAGTGATTCTTTGAACAAGCTATCAGCAAGCTATCTGACGTCATTAAATAGAAGTGAGGACCAGCTCATAAAGGAAATTTCTGATGGATGCCCTTTGCTTCACCTTGCCTGCCTAACAGCTGACAATGGCATGGTAGAACTACTCCTACAATATGGTGCAAATATAAATGCTTCTGATTCAAAAGGTCATACAGCACTGCACTATTGCATTATCAGCAAGAGATATCCTATTGCAAAATTGCTTCTTAGGAGGGGGGCCAATCCACGAGCTGTGAATGGCGAAGGTAAAACAGCGTTACAGCTTGCACCAGGATCATCCATTGATGACGGCGAGCTTGTTATTCTGTTAACAGGCAAACTCTTTACCGAAAGACGGTGA |
| Protein: MQFSKLDDSPMFRQQMQCMEESAEALRGRCLKFYKGCRKYTEGLGEGYDGDIAFASALEAFGGGHNDPICVAFGGPVMNKFTITLREIGTYKEVLRSQVEHMLNDKLQHFVNFDLQDIKEARKRFDKASVMYDQARDKFLSLRKSTRMDVTSAIQEELHNARSSFEQARFNLISALSVVEAKRRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAQQCRECSNYDQVSLHERMQEFMKHIDQESRHSVNDIFSSPREDSVRPAARSSQKVIEEVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDNRGMLYYYRKPFNWSSSGGSQSAVQRNGSSENGQGLLSRWLSSHYHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPIKVYTLQAENALDQMDWIEKINGVITSLLSSQITERFLSSSPMGSGDHHSVSESGSFIDSPDQTEIEEFTFDTGSHLHPTRSLRRQDYTIKIEKPIDVLRRVPGNDRCADCGAPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSILNLFQSLGNYCANTIWEELLHPTSSTSDEALRFSKSDRHKQFRPRKPNQDDPISVKEQFIHAKYAQKVFVFKSRDNQHPVVQQMWESIHANDKKGVYRHIVCSGIDVNAIHGQASFSDSLNKLSASYLTSLNRSEDQLIKEISDGCPLLHLACLTADNGMVELLLQYGANINASDSKGHTALHYCIISKRYPIAKLLLRRGANPRAVNGEGKTALQLAPGSSIDDGELVILLTGKLFTERR |